Showing posts with label artificial intelligence. Show all posts
Showing posts with label artificial intelligence. Show all posts

Saturday, March 18, 2023

AI and Snake Envenomation: A Game-Changer for Medical Treatment and Conservation

 

Photo by Pixabay: https://www.pexels.com/photo/blue-bright-lights-373543/

 Photo from pexels.com

Artificial intelligence (AI) is revolutionizing various industries, including healthcare. The use of AI capabilities, such as natural-language generation, computer vision, and robotic process automation, is growing exponentially. 

In a recent McKinsey report for example, it has been shown that organizations are increasingly making use of AI capabilities, with the average number of AI technologies used expected to double from 1.9 in 2018 to 3.8 in 2022

This growth is reflective of the widespread use of AI in fields like natural language generation and computer vision. Natural-language text understanding has advanced rapidly, moving from a mid-tier position in 2018 to ranking just behind computer vision in 2022, while robotic process automation and computer vision have consistently been the most widely adopted among these various capabilities.

In the field of herpetology and global health, AI can play a vital role in identifying snake species, which could have a significant impact on snakebite victims and conservation efforts.

AI in Snake Identification

Molecular methods such as the use of immunoassays for identifying snakes has its limitations, especially in resource-poor areas. Identification of snake species based on pattern recognition, on the other hand, although it is essential for medical professionals to do so in order to provide appropriate care, can be challenging. This gap can be closed with the help of AI models built on top of computer vision methods. While there are already AI models that can recognise common birds, fish, and butterflies, few have attempted to do the same for snakes, and those that have have focused on narrow taxonomic or geographical niches.

A recent study by Bolon et al. (2022) developed an AI model to identify snakes worldwide. The model achieved an impressive macro-averaged F1 score of 92.2% and demonstrated accurate classification of venomous and non-venomous lookalike species from Southeast Asia and sub-Saharan Africa. This technology could support snakebite victims, healthcare providers, zoologists, conservationists, and nature lovers across the globe.

F1 score is a metric used to evaluate the performance of classification models, particularly in situations where there is an imbalance in the number of samples between different classes. It is a combination of two other metrics: precision and recall. 

Precision basically means: of all the positive predictions I made, how many of them are truly positive? 

Precision = Number of True Positives (TP) divided by the Total Number of True Positives (TP) and False Positives (FP)  

Whereas recall means: of all the actual positive examples out there, how many of them did I correctly predict to be positive?

Recall = Number of True Positives (TP) divided by the Total Number of True Positives (TP) and False Negatives (FN).

The F1 score balances both precision and recall by taking their harmonic mean, providing a single value that represents the model's performance. The F1 score ranges from 0 to 1, where 1 indicates perfect precision and recall, and 0 means the model fails to make any correct predictions. 

Limitations of AI Models
 
Generative AI models may sometimes produce incorrect or biased information, posing risks in their application. The Bolon et al. (2022) study acknowledged limitations, such as the under-representation of snake species in some regions, the evaluation of model performance with easy-to-identify photos, and the need for further research in comparing lookalike species.

Addressing AI Bias

Human, systemic, and computational biases can affect AI models, impacting their usefulness and trustworthiness. Organizational leaders need to ensure AI systems improve human decision-making and reduce bias. Two imperatives for action include responsibly using AI to improve traditional human decision-making (this is where the human brains are still very much relevant) and the need of accelerating progress in addressing biases in AI.

Researchers also need to work on various techniques to ensure AI systems meet fairness definitions. One promising technique is counterfactual fairness, which guarantees that a model's decisions remain the same in a counterfactual world where sensitive attributes are changed.

Conclusion

AI has the potential to transform the medical and conservation fields, particularly in snake envenomation. The AI model developed by Bolon et al. (2022) represents a significant step forward in snake identification, ultimately benefiting snakebite victims, healthcare providers, and conservationists. However, addressing the limitations and biases in AI models remains a critical concern to fully harness the power of AI in these fields.

References

  • Bolon, I., Durso, A. M., Botero Mesa, S., Tollefson, S., Omori, R., Zurell, D., & Alcoba, G. (2022). An artificial intelligence model to identify snakes from across the world: Opportunities and challenges for global health and herpetology. PLOS Neglected Tropical Diseases, 16(2), e0010647. https://doi.org/10.1371/journal.pntd.0010647
  • Leong, K. (2022). Micro, macro & weighted averages of F1-score clearly explained. Towards Data Science. Retrieved from https://towardsdatascience.com/micro-macro-weighted-averages-of-f1-score-clearly-explained-b603420b292f
  • Manyika, J., Silberg, J., & Presten, M. (2019). What do we do about the biases in AI? Harvard Business Review. Retrieved from https://hbr.org/2019/10/what-do-we-do-about-the-biases-in-ai
  • McKinsey & Company. (2022). The state of AI in 2022 and a half-decade in review. https://www.mckinsey.com/capabilities/quantumblack/our-insights/the-state-of-ai-in-2022-and-a-half-decade-in-review#/
  • McKinsey & Company. (n.d.). What is generative AI? https://www.mckinsey.com/featured-insights/mckinsey-explainers/what-is-generative-ai#
  • National Institute of Standards and Technology. (2022). There's more to AI bias than biased data: NIST report highlights. https://www.nist.gov/news-events/news/2022/03/theres-more-ai-bias-biased-data-nist-report-highlights


 


 

Friday, March 03, 2023

ChatGPT Prompts to Enhance Research Proposal Writing

Before deep diving into the specific prompts that can be used to enhance research proposal writing,  let me start this post by repeatingly remind each other as acdemicians and professionals, to use ChatGPT responsibly and ethically. Whilst ChatGPT can be very useful in many aspects of research proposal writing, the onus still falls on the researchers to evaluate and verify the accuracy of the information generated by ChatGPT. ChatGPT does not absolve us of the accountability of being a thinking researcher and academician.

Q1. Should ChatGPT be included as a co-author of your paper?

I do not believe that ChatGPT can be a co-author under any circumstances because authorship is not merely about putting your name in the paper. Authorship also means taking personal accountability of the contents of the paper.  In this regard, ChatGPT is not a personal entity that can take personal accountability. 

Even in the guidelines by the International Committee of Medical Journal Editors (ICMJE) on who qualifies to be an author, an author is someone who fulfills the following:

  • Substantial contributions to the conception or design of the work; or the acquisition, analysis, or interpretation of data for the work; AND
  • Drafting the work or revising it critically for important intellectual content; AND
  • Final approval of the version to be published; AND
  • Agreement to be accountable for all aspects of the work in ensuring that questions related to the accuracy or integrity of any part of the work are appropriately investigated and resolved.

ChatGPT cannot fulfill the fourth criteria. 

Hypothetically, if ChatGPT can be a co-author for every academic paper produced with the aid of this AI model, then ChatGPT would become the most global author, and soon to be the most cited author, in every academic discipline and in every country of the planet as long as there is internet connection.

Q2. Is ChatGPT a friend or a foe in the academic circle?

This is the question I saw circulating in many websites. But to me, this is a wrong question to ask. ChatGPT, just like any other technology, is morally neutral. A knife can be a friend or a foe depending on who is using it. Or as Joseph C. Pitt famously said, "Guns don't kill people. People kill people". (Pitt, J.C. (2014). “Guns Don’t Kill, People Kill”; Values in and/or Around Technologies. In: Kroes, P., Verbeek, PP. (eds) The Moral Status of Technical Artefacts. Philosophy of Engineering and Technology, vol 17. Springer, Dordrecht).  This is known as the Value Neutrality Thesis.

The question, therefore, is not whether is ChatGPT a friend or a foe. Rather the question is, Do YOU want ChatGPT to be a friend or a foe?





Now, the specific suggested prompts that can be used to enhance research proposal writing:

If you already have your proposal ready

To evaluate the quality of the proposal

Pretend you are a reviewer. Evaluate the quality of this part of the proposal/write-up, highlighting both the good and bad points.

Pretend you are a reviewer. Evaluate the quality of this part of the write-up on [SECTION]. Be strict and be as critical as possible.

To evaluate the grammatical aspect of the proposal

Pretend you are a language editor. Evaluate the grammatical aspects of this write-up.

To edit the proposal

Pretend you are a language editor. Edit this write-up and send back to me. Do not remove the in-text citations in your response:

[TEXT]

 

But if you do not yet have a full proposal,

Brainstorming for Research Ideas 

I want to conduct a study in the field of [EXPERTISE/INTEREST]. Generate for me fundamental research ideas to work on. Highlight the novelty of each idea with the sentence "Novelty:..." 

I want to conduct a multi-disciplinary study in the field of [EXPERTISE/INTEREST]. Generate for me fundamental research ideas to work on. Highlight the novelty of each idea with the sentence "Novelty:..." 

Brainstorming for Research Titles 

I want to conduct a study on [RESEARCH TOPIC/IDEA]. Generate some titles for my research. 

Outlining Research Proposal 

I am interested to conduct a study on [RESEARCH TITLE]. Outline my research proposal. 

Brainstorming Research Questions 

I am interested to conduct a study on [RESEARCH TITLE]. Suggest some research questions for me. 

Generating Hypothesis 

Generate the corresponding hypotheses based on the following research questions: 

[RESEARCH QUESTION(S)]

Generating research objectives

Generate the corresponding research objectives based on the following research questions:

[RESEARCH QUESTION(S)]

Generating (or comparing) problem statement

Based on this literature review, generate for me the problem statement of this research: 

[LITERATURE REVIEW] 

Generating suggested conceptual framework| 

Based on these research questions, generate for me a conceptual framework for my research: 

Literature Review

Screening for relevance of search results 

I want to clean the dataset to only select the topic that is only relevant to “[RESEARCH TITLE]”. Read the titles and abstracts given and evaluate it weather it is about “[RESEARCH TITLE]” or not.   Based on the following data, list the feedback to include AUTHOR, TITLE, YEAR, Relevant (Yes/No) and Reason (please provide a simple reason if the info given related to the “[RESEARCH TITLE]” or not).  List your response in TABLE FORMAT.  [AUTHOR, TITLE, YEAR, Relevant (Yes/No), Reason]

Tabulate past studies 

Summarize these abstracts in columns. 

Write paragraphs based on past studies 

Paraphrase these abstracts in paragraphs. Do not remove in-text citations in your response. 

Generating suggestions for probable statistical methods based on research design 

I am conducting a research using [THEORETICAL FRAMEWORK, e.g. UTAUT-2 model] with [RESEARCH DESIGNS, e.g., 6 independent variables and one dependent variable]. Suggest the possible statistical analysis that I can use. 

Identifying for relevant research instruments 

Based on these research questions and title, list the appropriate instruments that can be used to measure these research questions: 

Generating new research instruments based on existing theoretical models/frameworks 

I want to conduct a study on [RESEARCH TITLE] using the [THEORETICAL MODELS, e.g. UTAUT-2 model/TAM model]. Generate a survey instrument for me. 

Generating feedback/comments on relevance of research to governmental policies 

Based on this title and the research objectives, generate for me the paragraph on the relevance of this research to governmental policy:

[TITLE]

[RESEARCH OBJECTIVES]

Identifying the United Nations Sustainability Developmental Goals (SDG) addressed in the research 

Based on this title and the research objectives, state which UN SDG addressed in this research?

[TITLE]

[RESEARCH OBJECTIVES] 

Generating feedback on how the research title can meet the Quintuple Helix of Innovation

Describe how the research title [RESEARCH TITLE] can meet the quintuple helix of innovation

 

 

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